Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015849924.1_cds_XP_016510996.1_23780
CDS Infomation

[gene=LOC107828227] [db_xref=GeneID:107828227] [protein=isocitrate lyase-like] [protein_id=XP_016510996.1] [location=complement(join(91831..91925,92481..93424,95560..95893,96443..96767,97581..97610))] [gbkey=CDS]
Sequence

ATGGCTGCATCTTACTCAGTCCCTTCAATGATAATGGAAGAAGAAGGGAGGTTTGAAGCA
GAAGTAGCAGAGGTACAAGCATGGTGGAACACAGAGAGGTTCAAGCTAACCAAGAGACCA
TATTCAGCTAGGGATGTGGTGGCACTGAGGGGCAACTTGAGGCAAAATTATGCATCAAAT
GAGTTGGCAAAAAAGCTGTGGACTACACTCAAAACTCACCAAGCAAATGGCACAGCATCA
AGAACATTTGGTGCACTTGACCCTGTTCAAGTCACTATGATGGCCAAACATTTGGACTCT
ATTTATGTTTCTGGTTGGCAGTGTTCCTCTACTCACACCTCCACCAATGAACCAGGTCCA
GACCTTGCTGATTATCCTTATGACACTGTCCCTAACAAAGTTGAACATCTCTTCATGGCT
CAACAATACCATGATAGAAAACAAAGGGAGGCAAGAATGAGCATGAGCAGAGAAGAGAGA
GCTAGAACTCCGTTTATCGATTACTTGAAGCCAATCATTGCTGATGGAGATACTGGTTTT
GGCGGCGCCACTGCCACTGTGAAACTCTGCAAGCTTTTTGTGGAGCGCGGCGCTGCTGGG
GTGCATATTGAGGACCAGTCATCCGTGACTAAGAAATGTGGTCATATGGCTGGCAAAGTT
CTTGTTGCGGTTAGTGAACATATTAACAGGTTAGTGGCTGCAAGGCTGCAATTTGATATT
ATGGGAGTGGAGACAGTTCTTGTAGCAAGAACTGATGCAGTAGCAGCAAATTTGATCCAA
ACCAATGTTGACACAAGGGATCACCAGTTCATTTTAGGAGCAACAAATCCAAATCTTAAA
GGCAAGAGTTTGGCCACAATTTTATCTGAATCAATGGCTGCAGGCAAAACAGGACCAGAA
CTTCAAGTCATTGAGGATAATTGGACAGCAGTGGCACAACTTAAGACATTTTCTGAATGT
GTAATTGATACAATAAATAACATGAACATATCGGGGTCCGAAAAGGAAAGAAAATTGAAT
GAATGGATGCATTATTCAAGCTATGAAAAATGTCTTTCACTAGAACAAGGCAGGGAAATT
GCTGAAAGATTAGGCCTTTCTAATATTTTCTTTGATTGGGATTTGCCAAGAACGAGAGAA
GGGTTTTATAGGTTTAAAGGGTCTGTAGAGGCTGCTATTGTTCGAGGCTGGGCTTTCGCG
AACCACGCTGACATTATCTGGATGGAAACTGCTAGTCCTGATTTGGTTGAGTGCACAAAA
TTTTCTGGAGGAGTTAAGTCAGTGCGGCCTGAAATAATGTTGGCTTATAATTTGTCACCT
TCATTTAATTGGGATGCATCAGGAATGAATGATTTTCAAATGATGGATTTTATTCCGAAA
ATCGCCAAGTTAGGTTACTGTTGGCAGTTTATTACATTGGCTGGTTTTCATGCTGATGCT
TTAATTGTTGATACATTTGCTAAGGATTTTGCTAGGAGAGGAATGTTAGCATATGTTGAG
AAAATACAAAGAGAGGAGAGGAAACATGGAGTTGATACATTGGCACATCAGAAATGGTCT
GGTGCTAATTATTATGATAGAGTTCTTAGGACTGTACAAGGAGGCATCACCTCTACTGCT
GCTATGGGCAAAGGGGTGACTGAGGAACAATTTGAGGAAAAATGGACAAGGGAAGGAGCA
ACAAACTTGGGTAATGAAAATATGGTGATTGCAAAGGCAAGAATGTAG

Peptide Sequence

PEP ID

XP_016510996.1
PEP Infomation

PREDICTED: isocitrate lyase-like [Nicotiana tabacum]
Sequence

MAASYSVPSMIMEEEGRFEAEVAEVQAWWNTERFKLTKRPYSARDVVALRGNLRQNYASN
ELAKKLWTTLKTHQANGTASRTFGALDPVQVTMMAKHLDSIYVSGWQCSSTHTSTNEPGP
DLADYPYDTVPNKVEHLFMAQQYHDRKQREARMSMSREERARTPFIDYLKPIIADGDTGF
GGATATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAVSEHINRLVAARLQFDI
MGVETVLVARTDAVAANLIQTNVDTRDHQFILGATNPNLKGKSLATILSESMAAGKTGPE
LQVIEDNWTAVAQLKTFSECVIDTINNMNISGSEKERKLNEWMHYSSYEKCLSLEQGREI
AERLGLSNIFFDWDLPRTREGFYRFKGSVEAAIVRGWAFANHADIIWMETASPDLVECTK
FSGGVKSVRPEIMLAYNLSPSFNWDASGMNDFQMMDFIPKIAKLGYCWQFITLAGFHADA
LIVDTFAKDFARRGMLAYVEKIQREERKHGVDTLAHQKWSGANYYDRVLRTVQGGITSTA
AMGKGVTEEQFEEKWTREGATNLGNENMVIAKARM

Transcript Sequence

Gene sequence data has not been registered.